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Acta Tropica

Elsevier BV

Preprints posted in the last 30 days, ranked by how well they match Acta Tropica's content profile, based on 13 papers previously published here. The average preprint has a 0.03% match score for this journal, so anything above that is already an above-average fit.

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Dengue spatiotemporal patterns in Minas Gerais, Brazil, 2014-2023: regional epidemic forces dominate over the environmental impact of the Brumadinho dam collapse

Fernandes, G. d. R.; Vaz, A. B. M.; Fonseca, P. L. C.; Oliveira, W. K.; Aguiar, E. R. G. R.; Lopes, B. C.; Mota-Filho, C. R.; Castro, M. L. P.; Starling, C. E.

2026-05-26 epidemiology 10.64898/2026.05.19.26353615 medRxiv
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Background: Dengue is a major public health problem in Brazil, and Minas Gerais is one of the states with the highest burden. In January 2019, the Brumadinho dam collapse released about 12 million cubic meters of iron ore tailings into the Paraopeba River basin, causing environmental disturbance that could plausibly affect vector habitats and dengue transmission. We evaluated the spatiotemporal dynamics of dengue in Minas Gerais from 2014 to 2023 and tested whether the disaster was associated with changes in affected municipalities. Methods: We performed an ecological spatiotemporal analysis using dengue notifications from SINAN for all municipalities in Minas Gerais (2014-2023). Municipalities were classified as Paraopeba basin, regional controls, or state controls. Temporal similarity was assessed using Pearson correlation-based hierarchical clustering and non-metric multidimensional scaling (NMDS). Sources of variation were examined with PERMANOVA and principal component analysis (PCA). A linear mixed-effects model with municipality as a random effect was used to test changes after 2019, with pre/post contrasts estimated from marginal means. Results: Dengue showed strong temporal synchrony across the state, with major epidemic peaks in 2015-2016, 2019, and 2023. Health region explained 31.5% of the variation in temporal incidence profiles (p = 0.001), whereas Paraopeba basin status explained no significant variation (p = 0.998). No temporal cluster was enriched for municipalities in the Paraopeba basin. PCA identified 2023, 2019, and 2016 as the main years driving variability. In the mixed model, year was significant (p < 0.001), but Paraopeba basin status and its interaction with time were not. Incidence increased significantly after 2019 in non-exposed municipalities (p < 0.001), but not in basin municipalities (p = 0.088). Conclusions: Dengue dynamics in Minas Gerais were driven mainly by regional and state-wide epidemic processes, with no significant independent effect of the Brumadinho dam collapse on notified dengue patterns.

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Spatial heterogeneity in Onchocerca volvulus IgG4 seroprevalence around a blackfly (Simulium damnosum s.l.) breeding site in Ghana and its implications for onchocerciasis serosurveillance

Kyomuhangi, I.; Otabil, K. B.; Acheampong, A.; Ofori, D. K.; Kudzordzi, P.-C.; Nyarko, P.; Fronterre, C.; Cheke, R. A.; Basanez, M.-G.; Hawkes, F.

2026-05-06 public and global health 10.64898/2026.05.05.26352446 medRxiv
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Progress towards elimination of onchocerciasis transmission is evaluated using entomological and serological indicators. The latter assesses anti-Ov16 IgG4 seroprevalence in children aged <10 years. A seroprevalence of <0.1% suggests that ivermectin Mass Drug Administration (MDA) can be stopped and post-treatment surveillance initiated, according to World Health Organization (WHO) guidelines. Surveillance of populations living in close proximity to vector breeding sites and first-line villages may mask spatial transmission heterogeneity. We mapped anti-Ov16 seroprevalence within a 25-km radius around a known Simulium damnosum s.l. breeding site in Asubende, Ghana, to assess its spatial patterns and their implications for serosurveillance. A cross-sectional survey was conducted in September-November 2024 in 30 settlements. Individuals aged [&ge;]3 years were recruited through convenience sampling. The Ov16 rapid diagnostic test (RDT) using dry blood spots was used to estimate overall and site-level seroprevalence. Generalized additive models were used to assess seroprevalence trends versus distance from the breeding site. Among 2,479 participants with valid RDT results, overall seroprevalence was 10.0% (95% CI: 8.9%, 11.3%) and increased with age. Seroprevalence varied across sites (0-24.4%) and declined with increasing distance from the breeding site. Among 584 children <10 years old, seroprevalence was 1.5% (95% CI: 0.7%, 2.9%). Adjusting for RDT sensitivity and specificity, seroprevalence in this age-group was 0.7%, (95% CI: 0%, 2.4%). Seropositive children were detected up to 18 km from the breeding site, but none were identified at it. The distance-related decrease in overall seroprevalence is consistent with spatial patterns in vector abundance at Asubende and implies higher cumulative exposure near the breeding site. The small number of children tested limited inference in this WHO target age-group. Detection of seropositive children away from, but not at, the breeding site highlights limitations of surveillance focused on first-line villages and supports broader spatial sampling to strengthen evidence for stop-MDA decisions. Author summaryAfter decades of onchocerciasis control using ivermectin, many countries hope to demonstrate that they have interrupted transmission of this vector-borne parasitic disease using serological surveys. It is unclear whether exposure to infection is spatially clustered around the riverine breeding sites of the blackfly vectors and therefore whether this is where serosurveillance should focus. To address this, we collected dried blood spots from 2,480 consenting participants aged 3-96 years old from 29 communities within a 25-km radius of a known blackfly breeding site in Asubende, Ghana. A rapid diagnostic test was used to test the blood spots for antibodies to the Onchocerca volvulus parasite. We found that overall seropositivity declined with increasing distance from the breeding site, which suggests that cumulative exposure is higher near the breeding site, where vector population is also high. However, seropositivity in children (3-10-year-olds, n= 584), which is indicative of recent transmission, was spatially distributed across the study area and found up to 18 km from the breeding site. These findings are relevant to serosurveillance sampling strategies intended to detect low levels of transmission, which could miss peripheral evidence of ongoing transmission if they are focussed at breeding sites and those villages closest to them.

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Biting Diptera-host network structure varies with anthropogenic landscape modification

Bellekom, B.; Hemprich-Bennett, D. R.; Acquaah, N. A.; Adams, B. A. R.; Donkor, E.; Aboagye-Antwi, F.; Lewis, O.; Hackett, T. D.

2026-05-06 public and global health 10.64898/2026.05.05.26352205 medRxiv
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O_LIRapid and ongoing anthropogenic habitat modification has the potential to alter the species composition, abundance and activity of biting insect communities, which are important disease vectors. The resulting changes in the network of interactions between biting insects and their hosts have implications for the transmission of vector-borne pathogens. C_LIO_LIWe used DNA metabarcoding of Diptera blood meals to document bipartite networks of interactions between biting flies (Diptera) and their hosts (including humans, domesticated and wild animals) across a gradient of anthropogenic habitat modification (village, agricultural and near-natural habitat) surrounding two rural villages in Ghana. C_LIO_LIWe collected 7,095 biting Diptera (of 42 species) from 30 collection sites, and generated sequencing data from 75 blood meals (from 29 species). These blood meals contained DNA from 18 vertebrate host species, dominated by humans and their livestock. C_LIO_LIHabitats with lower levels of anthropogenic modification had higher richness of biting Diptera and their host species. Species diversity and evenness did not differ significantly among habitats. Less modified habitats had higher network specificity, but connectance was highest in heavily modified habitats. C_LIO_LIHumans were highly embedded within biting Diptera-host networks, detected in 68% of blood meals. The networks reveal several potential disease transmission pathways linking competent vectors with susceptible hosts. The presence of mixed blood meals containing DNA of both human and wild animal origin highlights the potential for transmission of established and emerging zoonotic disease via bridge vectors. The high betweenness-centrality within interaction networks of the important disease vector Culex watti, combined with its high abundance across all levels of anthropogenic landscape modification, suggest that it may be a connector species, linking and facilitating disease transmission between spatially distinct communities. C_LIO_LISynthesis and applications: Our results are of epidemiological interest, as they identify the exposure of humans to pathogen transmission cycles across a gradient of anthropogenic habitat modification through the movement of opportunistic bridge vectors. We discuss the implications for the transmission of emerging and established zoonotic disease and for the targeting and implementation of initiatives to reduce disease exposure and transmission. C_LI

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Increasing frequency of secondary dengue infections in sequential outbreaks (2016-2024). Clinical impact and diagnostic challenges.

Espindola, S. L.; Pereson, M. J.; Lema, J. M.; Kachuk, A.; Carballo, G.; Aloisi, N.; Badano, M. N.; Miretti, M.; Di Lello, F. A.; Bare, P. C.

2026-06-01 infectious diseases 10.64898/2026.05.29.26354405 medRxiv
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Successive dengue virus (DENV) outbreaks can progressively reshape population immunity influencing disease expression and diagnostic performance. Objectives The aim was to evaluate the impact of secondary infections across sequential outbreaks on clinical severity, serotype dynamics and diagnostic concordance. Methods This retrospective study analyzed 976 febrile-stage samples from three sequential outbreaks in Misiones, Argentina. For serotyping and clinical analyses, 869 viremic samples confirmed by at least one direct method were included (2016: n=512; 2019: n=148; 2024: n=209). Additionally, 318 samples, including 107 non-viremic cases, were used to compare NS1 rapid diagnostic tests (NS1 Ag) and RT-PCR. Viral serotyping and clinical and laboratory markers of disease severity were evaluated. Results Secondary infections increased from 31.05% (2016) to 43.24% (2019) and 53.87% (2024) (p<0.0010). Serotype distribution shifted from DENV-1 predominance in 2016 (95.12%), DENV-1/DENV-4 co-circulation in 2019 (60.71%/39.29%), and DENV-2 predominance in 2024 (97.60%). Secondary infections were associated with more severe disease manifestations, particularly in 2024, with higher hematocrit (p=0.0120) and hemoglobin (p=0.0080), lower white blood cells (p=0.020) and platelet counts (p=0.0030), and elevated AST (p=0.0007) and ALT (p=0.0130). Concordance between NS1 Ag and RT-PCR was lower in secondary infections (k=0.457 vs k=0.759, p=0.0013). Conclusions The rising frequency of secondary infections may affect both clinical severity and diagnostic performance during outbreaks. The clinical impact was more evident in 2024, likely associated with the introduction of a new serotype. These findings highlight the need for optimized surveillance and diagnostic strategies to improve case detection and patient management during epidemics.

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Frequent introductions and climate suitability drive increasing dengue risk in Florida

Taylor-Salmon, E.; Chew, Y. T.; Lopes, R.; Locksmith, T.; Kopp, E.; Vergara, J.; Davis, A.; Mitchell, M.; Colarusso, P.; Schmedes, S.; Mock, V.; Scott, B.; Zimler, R.; Vasquez, C.; Moreno, M.; Paul, L. M.; Michael, S. F.; Breban, M. I.; Vogels, C. B. F.; Warren, J. L.; Carlson, C. J.; Stanek, D.; Heberlein, L.; Hill, V.; Morrison, A.; Grubaugh, N. D.

2026-05-04 epidemiology 10.64898/2026.05.01.26352185 medRxiv
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In recent years, detection of local dengue cases in Florida have increased in both frequency and geographical extent. From 2022 to 2024, consecutive outbreaks in Miami-Dade County were mainly caused by a single lineage of dengue virus (DENV) serotype 3, prompting questions about changing epidemiology and a transition towards endemicity. In this study, we used mathematical modeling and genomic epidemiology to reveal the spatiotemporal dynamics and drivers of local dengue cases in Florida. We found that annual clusters and outbreaks were caused by frequent short-lived DENV introductions, primarily from the Caribbean, and did not find evidence for local trans-seasonal DENV lineage persistence. Further, we show that the climate-driven increases in local suitability for Aedes aegypti transmission and travel-associated cases were the greatest risk factors for outbreaks in Miami-Dade and the geographic expansion of dengue in Florida. Overall, while we do not yet find evidence for endemicity, we demonstrate how climatic trends are enhancing the local public health risk caused by dengue in Florida.

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Last Mile elimination activities in Cambodia, October 2019 to December 2023

Filip, E.; Sovannaroth, S.; Kugler, A. M.; Brindle, H.; Ngor, P.; Chhun, B.; Ringwald, P.; Zhang, Z.; Rekol, H.

2026-05-18 public and global health 10.64898/2026.05.12.26353080 medRxiv
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Between 2015 and 2025, Cambodia reported a 99.9% decline in the number of cases of malaria. To aid acceleration of elimination, the National Center for Parasitology, Entomology and Malaria Control (CNM) implemented a package of interventions known as the Last Mile (LM) elimination program. The aim of this study was to determine the impact of the LM program on case numbers and evaluate the coverage of interventions. LM was rolled out between November 2020 and December 2023 in villages reporting a locally acquired case of Plasmodium falciparum or mixed infection with P. falciparum and P. vivax and included combinations of targeted drug administration (TDA), intermittent preventative treatment for forest goers (IPTf), active fever screening (AFS), the recruitment of a village or mobile malaria worker (VMW/MMW) and the top-up of insecticide-treated bed nets (ITN) depending on the vulnerability and receptivity of the village. A total of 103 full and 82 partial villages in seven provinces were included. Two rounds of TDA were administered, with a total of 10,678 individuals (67.6%) given during the first round and 9,678 (62.3%) during the second round. Coverage varied by province with none meeting the recommended threshold of 80%. IPTf was implemented each month among 35% (n=35) of full LM villages and 56% (n=42) of partial LM villages. A total of 11.7% (n=12) of full LM villages implemented AFS consistently on a weekly basis. Controlled interrupted time series showed no statistically significant difference in the number of malaria cases before and after the implementation of LM. Although we were unable to prove a statistically significant impact of LM, likely due to the small number of cases prior to LM, it is important to add to the limited evidence-based for Accelerator Strategies in countries approaching the elimination of malaria. Furthermore, findings from the feasibility and impact of individual interventions were used to change policy at the national level.

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Emerging combinations of climatic parameters for dengue proliferation in urban landscapes

Vaishya, A.; Patel, V.; Dahima, Y.; Chowdhury, L. S.; Jana, K.; Adhvaryu, B.; Mahadevia, D.; Shah, C.; Rajpurohit, S.

2026-05-21 ecology 10.64898/2026.05.19.726173 medRxiv
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Ectotherm insects growth and development are dictated by temperature and humidity. Conducive habitats and the availability of resources set ideal conditions for insect population growth. Mosquitoes require water, favorable temperature, and blood meal to survive. In this research, we picked a rapidly growing megacity, Ahmedabad, in western India, to explore and establish potential linkages between disease spread and meteorological conditions. Ahmedabad, with a population of over 8 million, is experiencing changes in rain and humidity patterns, pushing the city towards changing vector-borne disease dynamics. We examined dengue cases over ten years, 2012-22, and explored their connections with two prominent climatic variables, temperature and relative humidity. Our findings indicate that stable temperature (25-27.5 {degrees}C) and humidity (> 60%) interaction is a ruling factor in spikes in dengue cases in the city. While stable temperature ranges triggers the dengue cases, RH drives the explosive phases and sustainability of such episodes. Statistically significant increasing trends in temperatures, narrowing down of the day-night temperature ranges, and increasing night temperatures provide more stable temperature regimes in a warming world thereby likely to extend the dengue season beyond the usual monsoon season. Plain Language SummaryDengue incidences have been found to be associated with mosquito population outbreaks. Every year, thousands of lives are lost due to this deadly virus spread by mosquitoes. Particularly in the Indian subcontinent, a large proportion of these cases is associated with the monsoon season and rain patterns. In recent years, there have been abrupt spikes in dengue cases across Indian cities, particularly in western India. To understand this complex interaction of viral proliferation and local environmental conditions, the last ten years of dengue case patterns have been scanned in parallel to the climate data. Our findings suggest that stable temperature windows and humidity levels above certain thresholds trigger a rise in dengue cases. While stable temperature ranges trigger dengue cases, humidity drives such episodes explosive phases and sustainability. Our work pinpoints specific temperature-humidity combinations and suggests that local municipal corporations use them as warning indicators to initiate preventive measures.

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A Study To Analyse The Demographics And Injury Pattern Of Dog Bite Cases In Emergency Department Of A Tertiary Care Hospital In Chennai

Vinoth, D.; kumar, A.; jenifer, E.

2026-05-22 public and global health 10.64898/2026.05.20.26353645 medRxiv
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ABSTRACT Background Dog bite injuries are a major yet largely preventable public health concern worldwide. They contribute significantly to morbidity, healthcare burden, and economic costs, particularly in emergency department .The present study aims to analyse the demographics and injury pattern of dog bite cases presenting to the emergency department of a tertiary care hospital in Chennai. Methods We conducted a cross-sectional study with dog bite injured participants attending the Causality from November 2025 to April 2026 data was collected using a structured tool including details on demographics (Age, Gender, Education) injury related characteristics , history of pure bite site of dog bite injury type, WHO bitten criteria and information to management etc. We used here non probability statistical analysis and age specific dog bite cases and independent variables were analysed using SPSS (2.0 version). Result A total of Two hundred sixteen dog bite cases were analysed in the study by period of 6 months The majority of participants were 172 (79.6%) were above 18 years and 44 (20.4) were below 18 year, 130 (60%) from rural areas and 86 (39.8%) from urban areas, 136 (63.0%) of Victims presented within a day of the bite, 61( 28.2) next day and 19 (8.8%) in after one week 66 (30.6) were bitten by own dog and 150(69.4%)were bitten by neighbour / friended dog. 124(57.4) were bitten by stray dog 92(42.6) bitten by pet dog. 117(54.2) were vaccinated dog and 99(45.8%) were not vaccinated .110(50.9) victims were injured by laceration. 26(12.0%) were injured by puncture wound.46(21.3) were injured by abrasion 10(4.6) were injured by avulsion 15(6.9%) were injured by crush injury. 156(72.2%) were had minor wound.45(20.8%) victims had moderate wound and 15(6.9%) victims had severe wound. 112(51.9%) victims were taken antibiotics.104(48%) were not taken antibiotics. 185(85.6%) victims received tetanus toxoid, 31(14.4%) were not received tetanus toxoid. CONCLUSION There is a high burden of dog bite injuries from stray dogs in India. Despite early hospital presentation in many cases gaps in first aid practices and rabies post exposure prophylaxis were evident and highlighting inadequate awareness. Key words Rabies immunoglobulin, Dog bite, WHO criteria, Anti rabies vaccine, stray Dog, wound

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Computational drug repurposing identified Artemisinin and Mebendazole as potential inhibitors of virulence-associated proteins SKSR and essential kinases CpCDPK1 of Cryptosporidium parvum

Parveen, ; Saini, D.; Kumar, M.; Kapinder, ; Singh, A.; Jamil Khan, N.; Manzoor, N.; Sharma, M.; Kumar, P.

2026-05-19 molecular biology 10.64898/2026.05.17.725751 medRxiv
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Cryptosporidium parvum is a protozoan parasite responsible for cryptosporidiosis, significantly threatening immunocompromised individuals, particularly HIV/AIDS patients, by causing severe diarrhea and potential mortality. Current treatments are largely ineffective, prompting investigations into new therapeutic options. This study evaluated two antiparasitic drugs: Mebendazole, used for helminth infections, and Artemisinin, used for malaria. The SKSR gene family encodes virulence factors in C. parvum, and Calcium-dependent protein kinase1 (CpCDPK1) regulates the life cycle of C. parvum; targeting these proteins may reduce growth and infection in hosts. In the current study, molecular docking was conducted taking Mebendazole and Artemisinin drugs as ligands, SKSR gene family and CpCDPK1 proteins as drug targets. Results with SKSR showed binding energy of -4.9 kcal/mol, -6.72 kcal/mol for Mebendazole and Artemisinin, respectively. Whereas, with CpCDPK1, the binding energies were -6.44 kcal/mol, -9.18 kcal/mol for Mebendazole and Artemisinin, respectively. Docking of Nitazoxanide (an in-use drug for C. parvum) with SKSR and CpCDPK1 revealed binding energies -4.2 kcal/mol, -4.81 kcal/mol, respectively. The stability of the proteins (targets) upon binding to the ligands was assessed by performing all-atom MD simulations for 100ns using the GROMACS package. No major variations were observed upon binding of Artemisinin and Mebendazole to SKSR and CpCDPK1. The findings of MD simulations imply that both proteins maintain their stability upon binding of Artemisinin and Mebendazole. Molecular Docking and MD simulation studies suggest that Artemisinin and Mebendazole are potential candidates for repurposing in the treatment of C. parvum infections, with recommendations for in vitro studies to validate these findings.

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Predicting the median lifespan of ITNs using an area-measure of risk of physical durability: proof of concept of the Risk Index

Poyer, S.; Akiko Tangena, J.-A.; Mechan, F.; Worges, M.; Sternberg, E.; Koenker, H.; Fornadel, C.; Kilian, A.

2026-05-24 public and global health 10.64898/2026.05.21.26353786 medRxiv
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Background: The lifespan of insecticide-treated nets (ITNs) varies widely across settings, reflecting both intrinsic product characteristics and external factors related to use, care, and environment. While the resistance to damage (RD) score captures intrinsic product durability, there is no standardized metric to quantify contextual risks. This study presents a proof of concept for the Risk Index (RI), a composite measure of site-level risk factors for ITN physical durability and survival. Methods: We conducted a secondary analysis of durability monitoring data from 44 sites across 15 countries in sub-Saharan Africa, covering 14 ITN products. The RI was calculated as a weighted composite of 12 indicators spanning net handling, net care attitudes, and use environment. Associations between RI and median ITN survival were assessed using weighted linear regression and multivariable mixed-effects models adjusting for RD score, with country included as a random effect. Results: RI scores ranged from 25.1 to 83.7 across study sites. In bivariable analysis, a 10-point decrease in RI was associated with a 4.0-month increase in median ITN survival (95% CI: 1.7-6.3; p=0.001). In multivariable analysis adjusting for RD, this association remained significant but attenuated to 2.2 months (95% CI: 0.1-4.2; p=0.037). Independently, a 10-point increase in RD score was associated with a 3.5-month increase in survival (95% CI: 1.3-5.7; p=0.001). No interaction was observed between RI and RD. Predicted survival differed by approximately one year between the lowest- and highest-risk settings. Conclusion: The RI provides a standardized measure of contextual risk factors affecting ITN lifespan, independent of ITN product type. When used alongside a product's RD score, the RI enables improved interpretation of expected site-level variation in net performance. This combined framework offers a practical basis for incorporating behavioural and environmental risk into vector control planning and for tailoring ITN strategies to local conditions.

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Transcriptomic profiling of embryo-derived cell lines from the Chagas disease insect vector Rhodnius prolixus

de Andrade Tavares, L.; Garcia, A. C.; Bell-Sakyi, L.; Fontenele de Brito, T.; Pane, A.

2026-05-12 genetics 10.64898/2026.05.08.723764 medRxiv
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Rhodnius prolixus is a primary insect vector of Trypanosoma cruzi, the causative agent of Chagas disease, a neglected parasitosis endemic in Latin American countries. It has been estimated that Chagas disease affects 7-8 million people worldwide and is responsible for approximately 1000 deaths per year. Genetic and molecular studies in this species remain challenging due to its life cycle and feeding habits, thus hindering the development of new strategies to control their populations and reduce the diffusion of Chagas disease. Recently, two stable cell lines - RPE/LULS53 and RPE/LULS57 - were derived from Rhodnius embryos, which represent promising new tools to investigate the genetics of this insect vector. Here, we describe their gene expression landscapes through transcriptomic approaches. We show that 8,968 expressed genes are shared between the two cell lines, whereas 391 and 1,088 genes are uniquely expressed in RPE/LULS53 and RPE/LULS57, respectively. Although key components of primary developmental, immune and redox signaling pathways are expressed in both cell lines, some genes such as Frizzled-10-a-like and catalase show marked differences in expression. Our results strongly suggest that RPE/LULS53 and RPE/LULS57 likely represent two different cell phenotypes. Consistent with this, gene ontology analysis reveals that RPE/LULS53 is enriched for animal organ morphogenesis and stress response, while RPE/LULS57 for DNA-directed RNA polymerase activity, among others. Despite these differences, both cell lines express comparable levels of transcripts from resident transposable elements, including the highly abundant Mariner and LINE/I elements, as well as horizontally transferred transposons. Our findings shed light on the nature of the RPE/LULS53 and RPE/LULS57 embryo-derived cell lines and provide valuable transcriptomic resources for future genetic and functional studies in Rhodnius and other triatomine insect vectors. Author summaryRhodnius prolixus is a blood-feeding insect and a major vector of Chagas disease, a parasitosis endemic in Latin America and affecting millions of people worldwide. In the absence of effective drugs and vaccines, the control of the insect population represents a promising strategy to reduce the diffusion of the disease. Yet, genetic and functional studies in Rhodnius are extremely challenging due to its feeding habit and life cycle. To overcome these limitations, researchers have previously developed two stable cell lines derived from Rhodnius embryos. In this study, we provide the first characterization of the genes expressed in these cell lines. We found that, while the two cell lines share many expressed genes, each of them also has distinct gene expression patterns pointing to two different cell types with specialized functions. These differences likely affect the way they respond to stress and regulate biological processes. Our findings provide an important resource for researchers studying Rhodnius prolixus and other insect vectors, helping advance our understanding of the genetic and molecular mechanisms that control the insect development and mediate the interactions between insect vectors and the parasites they transmit

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How urban vegetation influences dynamics of Aedes albopictus egg density: three years of surveillance in Montpellier (France)

Bartholomee, C.; Sutter, C.; Fournet, F.; Bouhsira, E.; Moiroux, N.

2026-05-16 ecology 10.64898/2026.05.15.725325 medRxiv
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Nature-Based Solutions are increasingly promoted to address current urban challenges. While their potential effects on vector-borne disease risks have been documented, data on Aedes albopictus, a known arbovirus vector, remain limited in France. A previous study showed that urban vegetation moderately increases the abundance of adult mosquitoes of this species, but the monitoring period lasted only six months. Using ovitraps, we monitored Ae. albopictus egg density dynamics over multiple years (2022 to 2024) and analysed its environmental predictors in various urban environments. We included lagged meteorological variables, land cover metrics, and the cumulated egg densities recorded in the previous weeks as environmental predictors. Both parametric (GLMM) and non-parametric (Random Forest) models were fitted to weekly egg counts per trap. Our findings highlight that (i) egg density dynamics were related to how vegetation classes structured the landscape, (ii) growing degree days and cumulated number of eggs recorded in specific lagged time windows were the main contributors to egg density, and (iii) the non-parametric and parametric models performed similarly in terms of prediction accuracy.

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Suspected rabies exposure among animal-bite human cases in Busia district, Uganda: Prevalence, associated factors and delayed post-exposure care-seeking. A cross-sectional study

Wagaba, D.; Nabukenya, I.; Kizza, J.; Unith, H.; Kanyange, A.; Turyahabwe, C.; Kibuuka, H.; Mugisha, D.; Ogola, S. P.; Nabidda, S.; Kisakye, L. K.; Kalyango, J.

2026-06-01 epidemiology 10.64898/2026.05.29.26354408 medRxiv
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Background Rabies is a zoonotic neglected public health problem associated with animal bites, especially domestic carnivores claiming 59,000 deaths annually predominantly in developing countries of Africa and Asia. There is a high risk of exposure among rural communities endemic with animal rabies where adoption of prevention strategies is minimal. This study determined the prevalence of suspected rabies exposure, associated factors, and delayed post-exposure care-seeking among animal-bite human cases in Busia district, Uganda. Methods: This was a cross-sectional study that involved 332 consecutively sampled animal bite human cases that occurred within the period 2023 to 2024. Data for the bite cases from records were collected using a data abstraction tool. In addition, interviewer-administered semi-structured questionnaires were used to collect data on sociodemographic, animal-related and environmental characteristics. Approximate bite locations were collected using Global Positioning System (GPS) coordinates via Kobo collect. Analysis was carried out in STATA 17 using mixed effects modified Poisson regression for factors associated with suspected rabies exposure. Results: The median age of the bite cases was 18 (IQR: 9-36) with the male gender predominantly affected. The prevalence of suspected rabies exposure was 53.6% (95% Confidence interval - CI: 46.8-60.3). Factors associated were urban versus (vs) rural residence (adjusted prevalence ratio-aPR: 1.04, 95%CI: 1.00-1.08), being bitten by a stray animal (aPR: 1.28, 95% CI: 1.22-1.35) and wild animal (aPR: 1.22, 95% CI: 1.14-1.30) vs domestic animal, vaccination status of the biting animal i.e. vaccinated vs unvaccinated (aPR: 0.76, 95% CI: 0.69-0.85), provoked vs unprovoked bites (aPR: 0.82, 95% CI: 0.79-0.86), and distance to nearest river ([&ge;]5km) vs <5km (aPR: 0.93, 95% CI: 0.87-0.99). The prevalence of delayed post-exposure seeking was 23.0% (95% CI: 16.5-31.1) among the suspected rabies exposures. Conclusion: The study reveals a high prevalence of suspected rabies exposure. Factors associated are multidimensional i.e. are of human, animal and environmental origin. The one health paradigm should be emphasized during routine surveillance of rabies-related cases. The study observed that 1 in 5 bite cases delayed to seek care post bite exposure. We recommend collaborations between sectors, routine vaccination and awareness campaigns, and monitoring of wild carnivore populations and environmental dynamics in rabies-related surveillance.

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Modelling Seasonal Trends Of Malaria Incidence In Nasarawa State, Nigeria Using Health Facility Surveillance Data

Iheanacho, G. I.; Ijomah, M. A.; Alabere, D. I.

2026-05-15 infectious diseases 10.64898/2026.05.12.26353062 medRxiv
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Malaria transmission in Nigeria is highly seasonal and climate-sensitive, yet routine surveillance and meteorological datasets remain underutilized for predictive modelling at subnational levels. This study modelled seasonal malaria incidence trends in Nasarawa State, Nigeria using routine surveillance and climatic data. A retrospective ecological time-series study was conducted using monthly confirmed malaria incidence data from all 13 Local Government Areas of Nasarawa State between 2021 and 2025. Rainfall and temperature were examined as the climatic predictors. Seasonal decomposition and cross-correlation analyses were performed to identify the temporal patterns and lag structures. Seasonal Autoregressive Integrated Moving Average (SARIMA) and Seasonal Autoregressive Integrated Moving Average with Exogenous Variables (SARIMAX) models were developed using the Box-Jenkins framework. Model performance was evaluated using the Root Mean Square Error (RMSE) and Mean Absolute Percentage Error (MAPE). Malaria incidence showed pronounced seasonal peaks, with the highest transmission occurring during the rainy season. Cross-correlation analysis identified rainfall at a one-month lag and contemporaneous temperature as significant predictors of malaria incidence. The SARIMAX model outperformed the univariate SARIMA model, achieving strong predictive accuracy (MAPE = 8.7%). Forecast projections indicate sustained transmission with a peak incidence expected between June and August 2026. Malaria transmission in Nasarawa follows a predictable seasonal pattern that is influenced by climatic variability. Incorporating rainfall and temperature into SARIMAX models improves the forecasting performance and provides evidence supporting climate-informed malaria surveillance and preparedness in endemic settings.

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Contextual Barriers and Facilitators Influencing Implementation Fidelity of School-Based Preventive Chemotherapy for Schistosomiasis: A Qualitative Study in Two Endemic Districts in the Central Region, Ghana.

Moshi, H.; Msugupakulya, B. J.; Vahedi, M.; Glozah, F. N.

2026-05-04 public and global health 10.64898/2026.04.27.26351652 medRxiv
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BackgroundSchistosomiasis remains a significant neglected tropical disease of public health concern, particularly in Sub-Saharan African countries, including Ghana. For decades, school-based preventive chemotherapy (PC) has been the mainstay of schistosomiasis elimination in Ghana; however, implementation fidelity across districts falls below WHO recommendations, leading to persistent transmission. This study explores contextual factors that influence the implementation fidelity of school-based preventive chemotherapy for schistosomiasis in endemic districts. MethodsA phenomenological qualitative study design using a maximum-variation purposive sampling technique was conducted in two endemic districts (Gomoa East and Awutu Senya East) in Ghana, with 21 participants, six key informant interviews with district Neglected Tropical Diseases (NTDs) coordinators and School Health Education Program (SHEP) coordinators, and 15 in-depth interviews with head teachers and SHEP teachers. Recruitment of participants and data collection were conducted from 20/06/2025 to 30/07/2025 using semi-structured interview techniques and were thematically analyzed in NVivo version 15, guided by Braun & Clarke (2006). The thematic analysis blended inductive and deductive coding techniques; inductive allowed themes to emerge from the data, while deductive was guided by Damschroder et al. (2022) Consolidated Framework for Implementation Research (CFIR), and Carroll et al. (2007), a framework for implementation fidelity. ResultsImplementation fidelity was shaped by the interplay of sociocultural, organizational, and health system factors. Key barriers included socio-cultural beliefs and perceptions on treatment uptake, drug-related fears and adverse reactions, logistical constraints and resource limitations, lack of training and incentives for frontline implementers, inadequate community sensitization and engagement, and gaps in coverage and adherence to program protocols. Conversely, fidelity was much better in situations where awareness had been raised, the community was effectively engaged, frontline implementers were motivated, and collaboration was strong among the health and education sectors, suggesting that high fidelity can be achieved through a systemic response. ConclusionImplementation fidelity of school-based preventive chemotherapy is a context-dependent, system-driven process shaped by the complex interaction of socio-cultural and structural factors. Moving forward, to enhance fidelity and achieve sustained schistosomiasis control requires a shift toward a community-centered delivery approach that emphasizes community sensitization and engagement, reliable logistical support, effective training and motivation for frontline implementers, and intersectoral collaboration.

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Two Pellioditis biocontrol nematode species infect Ariolimax columbianus, the Pacific banana slug, and increase mortality in laboratory infectivity trials

Taylor, E. R.; Kulkarni, I.; Howe, D. K.; Richart, C. H.; Mc Donnell, R. J.; Denver, D.

2026-05-18 zoology 10.64898/2026.05.14.725190 medRxiv
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Gastropods are a highly diverse and often overlooked taxonomic group of significant ecological and economic importance. Some terrestrial gastropods are critical pests of commercial agriculture and home gardens worldwide. Malacopathogenic nematodes offer an effective biological control method of managing pest slugs and snails as a natural enemy. Pellioditis (syn. Phasmarhabditis) hermaphrodita and Pellioditis (syn. Phasmarhabditis) californica are two species of biocontrol nematodes that have been commercialized, sold as Nemaslug(R) and Nemaslug(R) 2.0 respectively on three continents. Although there is interest in bringing Nemaslug(R) products to the US, they are currently not permitted due to limited knowledge on their North American distribution and effects on non-target and native species. In this study, we investigated the impact of P. hermaphrodita and P. californica on Ariolimax columbianus across two slug-host life stages, in laboratory infectivity assays. The objectives were to 1. determine whether P. hermaphrodita and P. californica nematodes impact survival of A. columbianus, and 2. evaluate whether there are differential effects on survival in juvenile and adult life stages of A. columbianus, in laboratory infectivity trials. We found that P. hermaphrodita caused significant mortality in A. columbianus with 100% mortality observed in both juvenile and adult slug hosts. The P. californica treatment had significant effects on the juvenile A. columbianus group only, with 80% mortality. By contrast, only 16% of unexposed control juveniles and 4% of control adult slugs died during the experiment. These results indicate that P. hermaphrodita and P. californica are lethal to the native, non-target Pacific banana slug (A. columbianus) under laboratory conditions, with mortality differing between juvenile and adult host life stages. Given the ecological importance of A. columbianus, these findings raise concerns for potential non-target effects of P. californica and P. hermaphrodita on terrestrial gastropod communities and emphasize the need for testing biocontrol agents against multiple life stages.

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Protocol for a Cross-Sectional Comparative Analysis of Condom Use and STI Prevalence Among PrEP Users and Non-Users at a Specialised STI Wellness Clinic in Eswatini

Mafulu, Y. M.; Williams, V.; Ndlovu, P.; Ndabezitha, S.; Maseko, K. L.; Ndlovu, N.; Gwebu, S.; Matsenjwa, N.; Deku, B.; Mhlanga, N.; Dube, N.

2026-05-06 public and global health 10.64898/2026.05.04.26352404 medRxiv
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1.IntroductionSexually transmitted infections (STIs) represent a significant public health challenge globally, with the Southern Africa region experiencing particularly high rates. In Eswatini, the burden of STIs, including HIV, is alarming, necessitating effective prevention strategies. Pre-exposure prophylaxis (PrEP) has been introduced as a key intervention, yet its impact on condom use and STI prevalence remains underexplored. ObjectiveThis study aims to evaluate and compare condom use patterns and the prevalence of STIs among clients using PrEP and those who do not, among clients attending an STI Wellness Clinic in Eswatini. MethodsA prospective cross-sectional quantitative study will be conducted from February to June 2026 at the LaMvelase STI Wellness Centre. Participants will include HIV-negative individuals aged 15 and above, recruited through purposive sampling. Data will be collected via structured questionnaires and medical records, assessing condom use frequency, sexual behaviour, and STI rates. Laboratory testing will be conducted to confirm STI diagnoses. Statistical analyses will include descriptive statistics and logistic regression to identify associations between PrEP use and STI prevalence. ResultsThis protocol describes a study designed to assess the relationship between PrEP use, condom use behaviour, and STI prevalence among clients attending a specialised STI clinic in Eswatini. Findings will inform public health strategies and educational programs aimed at reducing STI rates and improving sexual health outcomes in Eswatini. ConclusionUnderstanding the dynamics between PrEP use and sexual health practices is crucial for optimising STI prevention strategies. This research will contribute valuable data to guide interventions and health policies and to design more effective intervention strategies in high STI prevalence settings, ultimately supporting efforts to mitigate the impact of STIs and HIV in Eswatini.

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Bayesian Spatio-Temporal Modeling and Hotspot Mapping of Malaria Risk in Ghana

Antwi, P.; Muhua, G.; Nyarko, E.

2026-05-22 epidemiology 10.64898/2026.05.19.26353586 medRxiv
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Purpose: This study developed a Bayesian hierarchical spatio-temporal modeling framework to analyze factors and trends in malaria risk across Ghana's 16 administrative regions from 2020 to 2024. The aim was to identify statistically significant areas with elevated or persistent malaria risk, to inform targeted intervention planning and support the National Malaria Elimination Program. Methods: This study utilized malaria incidence data from the Ghana Health Service's District Health Information Management System-II covering the years 2020 to 2024. Meteorological data were sourced from the Visual Crossing Weather Data, and regional population estimates were obtained from the Ghana Statistical Service. To analyze the data, a Bayesian hierarchical spatiotemporal model with a Negative Binomial (NB) likelihood was implemented using Integrated Nested Laplace Approximation to account for overdispersion. The model included Conditional Autoregressive priors for structured spatial effects, first-order random walk priors for temporal dependence, and spatio-temporal interaction terms. Additionally, Local Indicators of Spatial Association (LISA) analysis with 999 conditional permutations was conducted to identify statistically significant spatial clusters, including high-high hotspots and low-low cold spots. Results: The NB model significantly outperformed the Poisson model, leading to a reduction in the dispersion statistic from 9,227.55 to 1.11. Humidity with a 1-month lag showed the strongest positive association with malaria risk, while the ultraviolet index had the greatest protective effect. Predictive relative risk maps identified persistent high-risk clusters in the northern and northwestern regions, specifically Upper West, Upper East, Bono, Ahafo, and Western North. LISA analysis indicated that Bono-Ahafo has been a stable high-high cluster from 2020 to 2023, while Ashanti has remained a consistent low-high anomaly. Additionally, Greater Accra and Central regions formed a significant low-low cluster in 2024. Conclusion: The Bayesian hierarchical spatio-temporal framework effectively characterized the complex transmission dynamics of malaria in Ghana. It revealed significant spatial dependence, temporal correlation, and interactions between these factors. By identifying persistent high-risk clusters and statistically significant spatial associations, this framework provides essential evidence to guide resource allocation. These findings support Ghana's National Malaria Elimination Program Strategic Plan (2024-2028) by enabling targeted interventions in hotspots and optimizing the use of limited resources to sustain progress in low-transmission areas.

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Soda-baited RNAi Yeast Insecticides as Effective Attractive Targeted Sugar Baits (ATSBs) for Mosquito Control

Stewart, A. T. M.; Hamid-Adiamoh, M.; Sun, L.; Njoroge, T. M.; Winter-Reece, N.; Feng, R. S.; Singh, S.; James, L. D.; Sofhauser, B.; Dille, C.; Mohammed, A.; Severson, D. W.; Duman-Scheel, M.

2026-05-05 genetics 10.64898/2026.05.01.722182 medRxiv
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BackgroundAttractive Targeted Sugar Baits (ATSBs) are a promising, environmentally friendly approach for mosquito control, but the direct field application, scalability and long-term effectiveness of ATSBs across diverse mosquito species remain significant challenges. Methodology/Principal FindingsWe assessed the efficacy of a genetically engineered RNA interference (RNAi) yeast strain (Sh.463_56.10R) formulated in three sugar baits, soda (Coca-ColaTM), 10% sucrose, and a commercial mosquito bait (BaitStabTM), on Aedes, Anopheles and Culex mosquitoes. All RNAi yeast bait formulations induced significantly higher mean mortality (87-100%) compared to the control groups (0-9%; P<0.0001), but mosquitoes exhibited a higher feeding preference for RNAi yeast-soda baits, which induced mortality rates of 94-100% (P < 0.0001) recorded across all mosquito species. Additionally, to assess the competitiveness of the RNAi yeast-soda bait to other tropical sugar sources, semi-field choice assays were conducted in Trinidad, West Indies using competing flowering plants and fruits typically found in residential environments. The RNAi yeast-soda ATSB continued to perform well in the presence of competing floral and fruit sugar sources during both Aedes albopictus and Culex quiquefasciatus trials, though the presence of several fruits and flowers did reduce A. aegypti mortality, suggesting that further field testing will be necessary. The residual activity of the Sh.463_56.10R + soda formulation was retained for at least 14 months, with sustained 100% mortality in C. quinquefasciatus and 93-100% mortality in Aedes aegypti, Anopheles gambiae and Anopheles stephensi. The RNAi yeast-soda ATSB also performed well in semi-field studies performed with a prototype soda bottle feeder. Conclusions/SignificanceThis study demonstrates the potential of soda-baited RNAi yeast as a potent, long-lasting, and scalable platform for ATSB-based mosquito control as a component of integrated vector management programs. Author SummaryMosquito-borne diseases continue to affect millions of people worldwide, and current mosquito control methods face challenges such as low public uptake, insecticide resistance and environmental concerns. Here we evaluated a new and environmentally friendly approach to mosquito control using ATSBs. We tested genetically engineered species-specific yeast producing RNAi molecules capable of killing mosquitoes that feed on it. We mixed the yeast with three different sugar baits, including soda (Coca-ColaTM), 10% sucrose, and the commercial mosquito bait BaitStabTM formulation, and evaluated how well they worked against different mosquitoes. The results showed that the RNAi yeast mixed with soda was the most effective, killing up to 100% of mosquitoes in laboratory and outdoor tests. The bait remained effective in the presence of many competing natural tropical fruit and floral sugar sources. Remarkably, the bait, which can be delivered in a soda bottle feeder, stayed active for at least 14 months under simulated field conditions. These findings suggest that soda-based RNAi yeast baits could provide a practical, long-lasting and scalable tool for mosquito control and may help strengthen future strategies to reduce mosquito-borne diseases.

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Molecular and Morphological Evidence Reveals Cryptonema producta in Shui Hau, Hong Kong, Previously Misidentified as Anomalocardia flexuosa

Lam, H.; Lin, S.; Xu, Z.; Yau, C. S. T.; Wu, L.

2026-05-18 zoology 10.64898/2026.05.14.725093 medRxiv
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For over four decades, the bivalve Anomalocardia flexuosa has been recorded in Hong Kong coastal waters. However, the known native distribution of this heavily exploited commercial species is restricted to the Atlantic coast of South America, raising questions about the biogeographical validity of the Hong Kong populations. By employing an integrative taxonomic approach combining morphological re-evaluations and molecular phylogenetic analysis of the COI gene, we confirm that the species in Shui Hau, Hong Kong, China, has been historically misidentified. The population belongs to Cryptonema producta (syn. Anomalocardia producta).